| 1 | // Copyright (C) 2006 Tiago de Paula Peixoto <tiago@forked.de> |
| 2 | // Copyright (C) 2004,2009 The Trustees of Indiana University. |
| 3 | // |
| 4 | // Use, modification and distribution is subject to the Boost Software |
| 5 | // License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at |
| 6 | // http://www.boost.org/LICENSE_1_0.txt) |
| 7 | |
| 8 | // Authors: Douglas Gregor |
| 9 | // Jeremiah Willcock |
| 10 | // Andrew Lumsdaine |
| 11 | // Tiago de Paula Peixoto |
| 12 | |
| 13 | #define BOOST_GRAPH_SOURCE |
| 14 | #include <boost/foreach.hpp> |
| 15 | #include <boost/optional.hpp> |
| 16 | #include <boost/throw_exception.hpp> |
| 17 | #include <boost/graph/graphml.hpp> |
| 18 | #include <boost/graph/dll_import_export.hpp> |
| 19 | #include <boost/property_tree/ptree.hpp> |
| 20 | #include <boost/property_tree/xml_parser.hpp> |
| 21 | #include <map> |
| 22 | #include <string> |
| 23 | #include <vector> |
| 24 | |
| 25 | using namespace boost; |
| 26 | |
| 27 | namespace |
| 28 | { |
| 29 | |
| 30 | class graphml_reader |
| 31 | { |
| 32 | public: |
| 33 | graphml_reader(mutate_graph& g) : m_g(g) {} |
| 34 | |
| 35 | static boost::property_tree::ptree::path_type path(const std::string& str) |
| 36 | { |
| 37 | return boost::property_tree::ptree::path_type(str, '/'); |
| 38 | } |
| 39 | |
| 40 | void get_graphs(const boost::property_tree::ptree& top, |
| 41 | size_t desired_idx /* or -1 for all */, bool is_root, |
| 42 | std::vector< const boost::property_tree::ptree* >& result) |
| 43 | { |
| 44 | using boost::property_tree::ptree; |
| 45 | size_t current_idx = 0; |
| 46 | bool is_first = is_root; |
| 47 | BOOST_FOREACH (const ptree::value_type& n, top) |
| 48 | { |
| 49 | if (n.first == "graph" ) |
| 50 | { |
| 51 | if (current_idx == desired_idx || desired_idx == (size_t)(-1)) |
| 52 | { |
| 53 | result.push_back(x: &n.second); |
| 54 | if (is_first) |
| 55 | { |
| 56 | is_first = false; |
| 57 | BOOST_FOREACH (const ptree::value_type& attr, n.second) |
| 58 | { |
| 59 | if (attr.first != "data" ) |
| 60 | continue; |
| 61 | std::string key = attr.second.get< std::string >( |
| 62 | path: path(str: "<xmlattr>/key" )); |
| 63 | std::string value = attr.second.get_value(default_value: "" ); |
| 64 | handle_graph_property(key_id: key, value); |
| 65 | } |
| 66 | } |
| 67 | |
| 68 | get_graphs(top: n.second, desired_idx: (size_t)(-1), is_root: false, result); |
| 69 | if (desired_idx != (size_t)(-1)) |
| 70 | break; |
| 71 | } |
| 72 | ++current_idx; |
| 73 | } |
| 74 | } |
| 75 | } |
| 76 | |
| 77 | void run(std::istream& in, size_t desired_idx) |
| 78 | { |
| 79 | using boost::property_tree::ptree; |
| 80 | ptree pt; |
| 81 | read_xml(stream&: in, pt, |
| 82 | flags: boost::property_tree::xml_parser::no_comments |
| 83 | | boost::property_tree::xml_parser::trim_whitespace); |
| 84 | ptree gml = pt.get_child(path: path(str: "graphml" )); |
| 85 | // Search for attributes |
| 86 | BOOST_FOREACH (const ptree::value_type& child, gml) |
| 87 | { |
| 88 | if (child.first != "key" ) |
| 89 | continue; |
| 90 | std::string id = child.second.get(path: path(str: "<xmlattr>/id" ), default_value: "" ); |
| 91 | std::string for_ = child.second.get(path: path(str: "<xmlattr>/for" ), default_value: "" ); |
| 92 | std::string name |
| 93 | = child.second.get(path: path(str: "<xmlattr>/attr.name" ), default_value: "" ); |
| 94 | std::string type |
| 95 | = child.second.get(path: path(str: "<xmlattr>/attr.type" ), default_value: "" ); |
| 96 | key_kind kind = all_key; |
| 97 | if (for_ == "graph" ) |
| 98 | kind = graph_key; |
| 99 | else if (for_ == "node" ) |
| 100 | kind = node_key; |
| 101 | else if (for_ == "edge" ) |
| 102 | kind = edge_key; |
| 103 | else if (for_ == "hyperedge" ) |
| 104 | kind = hyperedge_key; |
| 105 | else if (for_ == "port" ) |
| 106 | kind = port_key; |
| 107 | else if (for_ == "endpoint" ) |
| 108 | kind = endpoint_key; |
| 109 | else if (for_ == "all" ) |
| 110 | kind = all_key; |
| 111 | else if (for_ == "graphml" ) |
| 112 | kind = graphml_key; |
| 113 | else |
| 114 | { |
| 115 | BOOST_THROW_EXCEPTION( |
| 116 | parse_error("Attribute for is not valid: " + for_)); |
| 117 | } |
| 118 | m_keys[id] = kind; |
| 119 | m_key_name[id] = name; |
| 120 | m_key_type[id] = type; |
| 121 | boost::optional< std::string > default_ |
| 122 | = child.second.get_optional< std::string >(path: path(str: "default" )); |
| 123 | if (default_) |
| 124 | m_key_default[id] = default_.get(); |
| 125 | } |
| 126 | // Search for graphs |
| 127 | std::vector< const ptree* > graphs; |
| 128 | handle_graph(); |
| 129 | get_graphs(top: gml, desired_idx, is_root: true, result&: graphs); |
| 130 | BOOST_FOREACH (const ptree* gr, graphs) |
| 131 | { |
| 132 | // Search for nodes |
| 133 | BOOST_FOREACH (const ptree::value_type& node, *gr) |
| 134 | { |
| 135 | if (node.first != "node" ) |
| 136 | continue; |
| 137 | std::string id |
| 138 | = node.second.get< std::string >(path: path(str: "<xmlattr>/id" )); |
| 139 | handle_vertex(v: id); |
| 140 | BOOST_FOREACH (const ptree::value_type& attr, node.second) |
| 141 | { |
| 142 | if (attr.first != "data" ) |
| 143 | continue; |
| 144 | std::string key |
| 145 | = attr.second.get< std::string >(path: path(str: "<xmlattr>/key" )); |
| 146 | std::string value = attr.second.get_value(default_value: "" ); |
| 147 | handle_node_property(key_id: key, descriptor: id, value); |
| 148 | } |
| 149 | } |
| 150 | } |
| 151 | BOOST_FOREACH (const ptree* gr, graphs) |
| 152 | { |
| 153 | bool default_directed |
| 154 | = gr->get< std::string >(path: path(str: "<xmlattr>/edgedefault" )) |
| 155 | == "directed" ; |
| 156 | // Search for edges |
| 157 | BOOST_FOREACH (const ptree::value_type& edge, *gr) |
| 158 | { |
| 159 | if (edge.first != "edge" ) |
| 160 | continue; |
| 161 | std::string source |
| 162 | = edge.second.get< std::string >(path: path(str: "<xmlattr>/source" )); |
| 163 | std::string target |
| 164 | = edge.second.get< std::string >(path: path(str: "<xmlattr>/target" )); |
| 165 | std::string local_directed |
| 166 | = edge.second.get(path: path(str: "<xmlattr>/directed" ), default_value: "" ); |
| 167 | bool is_directed |
| 168 | = (local_directed.empty() ? default_directed |
| 169 | : local_directed == "true" ); |
| 170 | if (is_directed != m_g.is_directed()) |
| 171 | { |
| 172 | if (is_directed) |
| 173 | { |
| 174 | BOOST_THROW_EXCEPTION(directed_graph_error()); |
| 175 | } |
| 176 | else |
| 177 | { |
| 178 | BOOST_THROW_EXCEPTION(undirected_graph_error()); |
| 179 | } |
| 180 | } |
| 181 | size_t old_edges_size = m_edge.size(); |
| 182 | handle_edge(u: source, v: target); |
| 183 | BOOST_FOREACH (const ptree::value_type& attr, edge.second) |
| 184 | { |
| 185 | if (attr.first != "data" ) |
| 186 | continue; |
| 187 | std::string key |
| 188 | = attr.second.get< std::string >(path: path(str: "<xmlattr>/key" )); |
| 189 | std::string value = attr.second.get_value(default_value: "" ); |
| 190 | handle_edge_property(key_id: key, descriptor: old_edges_size, value); |
| 191 | } |
| 192 | } |
| 193 | } |
| 194 | } |
| 195 | |
| 196 | private: |
| 197 | /// The kinds of keys. Not all of these are supported |
| 198 | enum key_kind |
| 199 | { |
| 200 | graph_key, |
| 201 | node_key, |
| 202 | edge_key, |
| 203 | hyperedge_key, |
| 204 | port_key, |
| 205 | endpoint_key, |
| 206 | all_key, |
| 207 | graphml_key |
| 208 | }; |
| 209 | |
| 210 | void handle_vertex(const std::string& v) |
| 211 | { |
| 212 | bool is_new = false; |
| 213 | |
| 214 | if (m_vertex.find(x: v) == m_vertex.end()) |
| 215 | { |
| 216 | m_vertex[v] = m_g.do_add_vertex(); |
| 217 | is_new = true; |
| 218 | } |
| 219 | |
| 220 | if (is_new) |
| 221 | { |
| 222 | std::map< std::string, std::string >::iterator iter; |
| 223 | for (iter = m_key_default.begin(); iter != m_key_default.end(); |
| 224 | ++iter) |
| 225 | { |
| 226 | if (m_keys[iter->first] == node_key) |
| 227 | handle_node_property(key_id: iter->first, descriptor: v, value: iter->second); |
| 228 | } |
| 229 | } |
| 230 | } |
| 231 | |
| 232 | any get_vertex_descriptor(const std::string& v) { return m_vertex[v]; } |
| 233 | |
| 234 | void handle_edge(const std::string& u, const std::string& v) |
| 235 | { |
| 236 | handle_vertex(v: u); |
| 237 | handle_vertex(v); |
| 238 | |
| 239 | any source, target; |
| 240 | source = get_vertex_descriptor(v: u); |
| 241 | target = get_vertex_descriptor(v); |
| 242 | |
| 243 | any edge; |
| 244 | bool added; |
| 245 | boost::tie(t0&: edge, t1&: added) = m_g.do_add_edge(source, target); |
| 246 | if (!added) |
| 247 | { |
| 248 | BOOST_THROW_EXCEPTION(bad_parallel_edge(u, v)); |
| 249 | } |
| 250 | |
| 251 | size_t e = m_edge.size(); |
| 252 | m_edge.push_back(x: edge); |
| 253 | |
| 254 | std::map< std::string, std::string >::iterator iter; |
| 255 | for (iter = m_key_default.begin(); iter != m_key_default.end(); ++iter) |
| 256 | { |
| 257 | if (m_keys[iter->first] == edge_key) |
| 258 | handle_edge_property(key_id: iter->first, descriptor: e, value: iter->second); |
| 259 | } |
| 260 | } |
| 261 | |
| 262 | void handle_graph() |
| 263 | { |
| 264 | std::map< std::string, std::string >::iterator iter; |
| 265 | for (iter = m_key_default.begin(); iter != m_key_default.end(); ++iter) |
| 266 | { |
| 267 | if (m_keys[iter->first] == graph_key) |
| 268 | handle_graph_property(key_id: iter->first, value: iter->second); |
| 269 | } |
| 270 | } |
| 271 | |
| 272 | void handle_graph_property( |
| 273 | const std::string& key_id, const std::string& value) |
| 274 | { |
| 275 | m_g.set_graph_property(name: m_key_name[key_id], value, value_type: m_key_type[key_id]); |
| 276 | } |
| 277 | |
| 278 | void handle_node_property(const std::string& key_id, |
| 279 | const std::string& descriptor, const std::string& value) |
| 280 | { |
| 281 | m_g.set_vertex_property(name: m_key_name[key_id], vertex: m_vertex[descriptor], value, |
| 282 | value_type: m_key_type[key_id]); |
| 283 | } |
| 284 | |
| 285 | void handle_edge_property( |
| 286 | const std::string& key_id, size_t descriptor, const std::string& value) |
| 287 | { |
| 288 | m_g.set_edge_property( |
| 289 | name: m_key_name[key_id], edge: m_edge[descriptor], value, value_type: m_key_type[key_id]); |
| 290 | } |
| 291 | |
| 292 | mutate_graph& m_g; |
| 293 | std::map< std::string, key_kind > m_keys; |
| 294 | std::map< std::string, std::string > m_key_name; |
| 295 | std::map< std::string, std::string > m_key_type; |
| 296 | std::map< std::string, std::string > m_key_default; |
| 297 | std::map< std::string, any > m_vertex; |
| 298 | std::vector< any > m_edge; |
| 299 | }; |
| 300 | |
| 301 | } |
| 302 | |
| 303 | namespace boost |
| 304 | { |
| 305 | void BOOST_GRAPH_DECL read_graphml( |
| 306 | std::istream& in, mutate_graph& g, size_t desired_idx) |
| 307 | { |
| 308 | graphml_reader reader(g); |
| 309 | reader.run(in, desired_idx); |
| 310 | } |
| 311 | } |
| 312 | |